BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E07LP1|AL429411
(996 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig767 938 0.0
3x_Contig1216 901 0.0
>3x_Contig767
Length = 1770
Score = 938 bits (473), Expect = 0.0
Identities = 484/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Plus
Query: 511 aagcttcaaacctaacctcttagcaactaactcggctaggttacgatgcacatcgggagc 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagcttcaaacctaacctcttagcaactaactcggctaggttacgatgcacatcgggagc 60
Query: 571 caaaagcttgatagaattggttgccattttcttatcagtattgaaaagtgtttaaatgat 630
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 caaaagcttgatagaattggttgccattttcttatcagtattgacaagtgtttaaatgat 120
Query: 631 gtgtttgttataacagtttgcttatttttcttcacaaaactgaagtacgagggggtatgt 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgtttgttataacagtttgcttatttttcttcacaaaactgaagtacgagggggtatgt 180
Query: 691 gaatcgaatcaggagcacaaacgaagcagattacctagttcaagccaaaaccaaacctgc 750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaatcgaatcaggagcacaaacgaagcagattacctagttcaagccaaaaccaaacctgc 240
Query: 751 ctatttcctcccaacttcaaacatcttcatcttaagtcttttcatcaaaaaacctttctt 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctatttcctcccaacttcaaacatcttcatcttaagtcttttcatcaaaaaacctttctt 300
Query: 811 tggcatccggaacttcttttagatgagg-aaaaattttcctttctttttcatgattggaa 869
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 tggcatccggaacttcttttagatgaggaaaaaattttcctttctttttcatgattggaa 360
Query: 870 gagaaagactctttggttggctaaggaagactcagtttcattgtggaaatattgccggta 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gagaaagactctttggttggctaaggaagactcagtttcattgtggaaatattgccggta 420
Query: 930 taaatggcgtaggaagtcgagattttgacatgcaagaatcaattattgaactttwaatat 989
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 421 taaatggcgtaggaagtcgagattttgacatgcaagaatcaattattgaactttaaatat 480
Query: 990 tctatct 996
|||||||
Sbjct: 481 tctatct 487
>3x_Contig1216
Length = 5132
Score = 901 bits (454), Expect = 0.0
Identities = 464/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Minus
Query: 1 agctctttccttatgaatcaaggcaaaattcaaatccaaacggtcggccaaaccagcggc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 466 agctctttccttatgaatcaaggcaaagttcaaatccaaacggtcggccaaaccagcggc 407
Query: 61 acgtttggcaccaccagcatccggggagataatgatagcttctttgaagttaacattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acgtttggcaccaccagcatccggggagataatgatagcttctttgaagttaacattttc 347
Query: 121 cttaatatatcttacaactgaaggctcagcatataagttatctactggaacatcaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 cttaatatatcttacaactgaaggctcagcatataagttatctactggaacatcaaagaa 287
Query: 181 cccttgtatttgagaagcgtgcaagtccatggtgatgacatggtcacaaccagcagtggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 cccttgtatttgagaagcgtgcaagtccatggtgatgacatggtcacaaccagcagtggt 227
Query: 241 cagcatgtcagccatcaacttagcagtaattggagcacgagacttatcctttctatcctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 cagcatgtcagccatcaacttagcagtaattggagcacgagacttatcctttctatcctg 167
Query: 301 tctagcgtatgggaaatttggaataatagctgtaattcttctagcagacgcggtctttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 tctagcgtatgggaaatttggaataatagctgtaattcttctagcagacgcggtctttga 107
Query: 361 tgcattaatcattattaatagctcaaggacacgatcattcacatcaccagatccgatctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 tgcattaatcattattaatagctcaaggacacgatcattcacatcaccagatccgatctg 47
Query: 421 tgtaacaatgaagatatctt-ggtctctaacagattcaccaatgga 465
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 46 tgtaacaatgaagatatcttgggtctctaacagattcaccaatgga 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8286
Number of Sequences: 1807
Number of extensions: 8286
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 2
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)